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miRWalk
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miRWalk is a database that provides information on miRNA and mRNA interactions, pathways, diseases and more. It is currently undergoing migration to a new server and some functions are not yet available.
miRWalk is an open-source platform providing an intuitive interface that generates predicted and validated miRNA-binding sites of known genes of human, mouse, rat, dog and cow. The core of miRWalk is the miRNA target site prediction with the ...
miRWalk is a database that integrates miRNA-target prediction algorithms, validated interactions and transcript annotations. Users can search for miRNAs or genes and filter the results by various criteria, such as binding probability, p-value, pathway and miRTarBase.
miRWalk数据库是一个集成了多个数据库的miRNA靶基因预测平台，可以按miRNA或基因进行搜索，并提供网络分析和富集分析等功能。本文介绍了miRWalk数据库的主要使用方法和优势，以及如何下载和筛选结果。
miRWalk: An online resource for prediction of microRNA binding sites. [PMID: 30335862]
miRWalk--database: prediction of possible miRNA binding sites by "walking" the genes of three genomes., Dweep, Harsh, Sticht Carsten, Pandey Priyanka, and Gretz Norbert
miRWalk (http://mirwalk.uni-hd.de/) is a publicly available comprehensive resource, hosting the predicted as well as the experimentally validated microRNA (miRNA)-target interaction pairs.
To address this issue, we present miRWalk, a comprehensive database on miRNAs, which hosts predicted as well as validated miRNA binding sites, information on all known genes of human, mouse and rat.
Search for interactions between miRNAs and genes associated with a disease (data obtained from aliance of genome resources).
基因序列图 除了以上在线检索的方式之外， 也可以将miRWalk整个的数据库下载下来，在本地的机器上进行预测，这样比较方便对批量的miRNA和靶基因进行预测。 目前支持靶位点在基因的5UTR，CDS，3UTR 三种数据，但是一般miRNA的靶位点在3UTR区域。 所以下载3UTR即可。