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miRWalk is a database that provides information on miRNA and mRNA interactions, pathways, diseases and more. It is currently undergoing migration to a new server and some functions are not yet available.
Search with miRNA names (e.g. hsa-miR-214-3p) or Accession numbers (e.g. MIMAT0000271) based on current miRBase.
miRWalk is an open-source platform providing an intuitive interface that generates predicted and validated miRNA-binding sites of known genes of human, mouse, rat, dog and cow. The core of miRWalk is the miRNA target site prediction with the ...
miRWalk (http://mirwalk.uni-hd.de/) is a publicly available comprehensive resource, hosting the predicted as well as the experimentally validated microRNA (miRNA ...
To address this issue, we present miRWalk, a comprehensive database on miRNAs, which hosts predicted as well as validated miRNA binding sites, information on all known genes of human, mouse and rat. All mRNAs, mitochondrial genes and 10 kb upstream flanking regions of all known genes of human, mouse and rat were analyzed by using a newly ...
To address this issue, we present miRWalk, a comprehensive database on miRNAs, which hosts predicted as well as validated miRNA binding sites, information on all known genes of human, mouse and rat. All mRNAs, mitochondrial genes and 10 kb upstream flanking regions of all known genes of human, mouse and rat were analyzed by using a newly ...
Server Hardware. miRWalk is currently hostet on virtual server structure on a cloud infrastructure of the Heidelberg University (heiCloud). heiCloud based on Openstack, an open source and scalable operating system for building both public and private clouds.Most of the prediction work was performed on the bwUniCluster, part of the bwHPC.
miRWalk is a platform that generates predicted and validated miRNA-binding sites of known genes of human, mouse, rat, dog and cow. It uses a machine learning based algorithm, TarPmiR, and integrates results from other databases with miRNA-target interactions.
To enable large-scale enrichment analysis, a novel feature named "Customized data set" is implemented within miRWalk2.0 that allows users to generate a customized list of putative targets of ...
miRWalk is a database that integrates miRNA-target prediction algorithms, validated interactions and transcript annotations. Users can search for miRNAs or genes and filter the results by various criteria, such as binding probability, p-value, pathway and miRTarBase.