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Implements miscellaneous functions for interpretation of single-cell RNA-seq data. Methods are provided for assignment of cell cycle phase, detection of highly variable and significantly correlated genes, identification of marker genes, and other common tasks in routine single-cell analysis workflows.
The Comprehensive R Archive Network (CRAN) provides access to R software, packages, and documentation for statistical computing and graphics.
Single Cell Rna-seq ANalysis. Contribute to elswob/SCRAN development by creating an account on GitHub.
Implements miscellaneous functions for interpretation of single-cell RNA-seq data. Methods are provided for assignment of cell cycle phase, detection of highly variable and significantly correlated genes, identification of marker genes, and other common tasks in routine single-cell analysis workflows.
The meaning of SCRAN is scraps of food : leftovers; also : grub, provisions.
2 meanings: 1. slang food; provisions 2. → See bad scran to.... Click for more definitions.
scran (third-person singular simple present scrans, present participle scranning, simple past and past participle scranned) (slang, Liverpool, Manchester, Scotland) To eat. (slang, Northern England) To steal in an impish manner; pinch, nick.
scran (version 1.0.3) Methods for Single-Cell RNA-Seq Data Analysis Description This package implements a variety of low-level analyses of single-cell RNA-seq data. Methods are provided for normalization of cell-specific biases, assignment of cell cycle phase, and detection of highly variable and significantly correlated genes.
Factsheet What does the noun scran mean? There are five meanings listed in OED's entry for the noun scran, one of which is labelled obsolete. See 'Meaning & use' for definitions, usage, and quotation evidence.
The scran package implements methods to perform low-level processing of scRNA-seq data, including cell cycle phase assignment, variance modelling and testing for marker genes and gene-gene correlations. This vignette provides brief descriptions of these methods and some toy examples to demonstrate their use.