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NCBI Finder
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ORF finder searches for open reading frames (ORFs) in the DNA sequence, returns the range and protein translation of each ORF. Search newly sequenced DNA for potential protein encoding segments, verify predicted proteins with SMARTBLAST or BLASTP.
The ORF Finder (Open Reading Frame Finder) is a graphical analysis tool which finds all open reading frames of a selectable minimum size in a user's sequence or in a sequence already in the database. This tool identifies all open reading frames using the standard or alternative genetic codes. The deduced amino acid sequence can be saved in various formats and searched against the sequence ...
Search all biomedical databases provided by the National Center for Biotechnology Information (NCBI), an agency of the U.S. National Library of Medicine at the NIH
AMRFinderPlus NCBI has developed AMRFinderPlus, a tool that identifies AMR genes, resistance-associated point mutations, and select other classes of genes using protein annotations and/or assembled nucleotide sequence. AMRFinderPlus is used in the Pathogen Detection pipeline, and these data are displayed in NCBI's Isolate Browser.
NCBI Databases and Tools This link opens in a new window The full list of biomedical and genomic databases and tools provided by the National Center for Biotechnology Information (NCBI).
Welcome to NCBI The National Center for Biotechnology Information advances science and health by providing access to biomedical and genomic information.
PubMed® comprises more than 39 million citations for biomedical literature from MEDLINE, life science journals, and online books. Citations may include links to full text content from PubMed Central and publisher web sites.
Gene Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches. BLAST can be used to infer functional and evolutionary relationships between sequences as well as help identify members of gene families.
NCBI's Gene resources include collections of curated nucleotide sequences used as references, sequence clusters to predict and study homologs, and various databases and tools for the study of gene expression.